Index

A

add_df() (xyzpy.gen.farming.Sampler method) (xyzpy.Sampler method) add_ds() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) all_nan_result (xyzpy.Crop property) (xyzpy.gen.cropping.Crop property) auto_heatmap() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) auto_histogram() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) auto_iheatmap() (in module xyzpy) (in module xyzpy.plot.plotter_bokeh)

auto_ilineplot() (in module xyzpy) (in module xyzpy.plot.plotter_bokeh) auto_iscatter() (in module xyzpy) (in module xyzpy.plot.plotter_bokeh) auto_lineplot() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) auto_scatter() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) auto_xyz_ds() (in module xyzpy) AutoILinePlot (class in xyzpy.plot.plotter_bokeh)

B

benchmark() (in module xyzpy) Benchmarker (class in xyzpy)

bokeh_multi_plot() (in module xyzpy.plot.plotter_bokeh) bshow() (in module xyzpy.plot.plotter_bokeh)

C

cache_to_disk() (in module xyzpy) calc_clean_up_default_res() (in module xyzpy.gen.cropping) calc_data_range() (xyzpy.plot.core.Plotter method) calc_line_colors() (xyzpy.plot.core.Plotter method) calc_plot_range() (xyzpy.plot.core.Plotter method) calc_progress() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) calc_row_col_datasets() (in module xyzpy.plot.core) calc_use_legend_or_colorbar() (xyzpy.plot.core.Plotter method) case_runner() (in module xyzpy) (in module xyzpy.gen.case_runner) case_runner_to_df() (in module xyzpy) (in module xyzpy.gen.case_runner) case_runner_to_ds() (in module xyzpy) (in module xyzpy.gen.case_runner) check_bad() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) check_runs() (in module xyzpy) choose_batch_settings() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) cimple() (in module xyzpy) (in module xyzpy.plot.color)

cimple_bright() (in module xyzpy) (in module xyzpy.plot.color) combo_runner() (in module xyzpy) (in module xyzpy.gen.combo_runner) combo_runner_to_df() (in module xyzpy) (in module xyzpy.gen.combo_runner) combo_runner_to_ds() (in module xyzpy) (in module xyzpy.gen.combo_runner) constants (xyzpy.gen.farming.Runner property) (xyzpy.Runner property) converged() (xyzpy.RunningStatistics method) convert_colors() (in module xyzpy) (in module xyzpy.plot.color) count (xyzpy.RunningStatistics attribute) covar (xyzpy.RunningCovariance property) Crop (class in xyzpy) (class in xyzpy.gen.cropping) Crop() (xyzpy.gen.farming.Harvester method) (xyzpy.gen.farming.Runner method) (xyzpy.gen.farming.Sampler method) (xyzpy.Harvester method) (xyzpy.Runner method) (xyzpy.Sampler method)

D

delete_all() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) delete_df() (xyzpy.gen.farming.Sampler method) (xyzpy.Sampler method) delete_ds() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method)

dictify() (in module xyzpy.gen.prepare) drop_sel() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) ds (xyzpy.Benchmarker attribute) (xyzpy.plot.core.Plotter property)

E

ensure_dirs_exists() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) err (xyzpy.RunningStatistics attribute)

estimate_from_repeats() (in module xyzpy) expand_dims() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method)

F

find_missing_cases() (in module xyzpy) (in module xyzpy.gen.case_runner) fn (xyzpy.Crop property) (xyzpy.gen.cropping.Crop property) fn_args (xyzpy.gen.farming.Runner property) (xyzpy.Runner property)

format_number_with_error() (in module xyzpy) full_df (xyzpy.gen.farming.Sampler attribute) (xyzpy.gen.farming.Sampler property) (xyzpy.Sampler attribute) (xyzpy.Sampler property) full_ds (xyzpy.gen.farming.Harvester property) (xyzpy.Harvester property)

G

gen_cases_fnargs() (xyzpy.gen.farming.Sampler method) (xyzpy.Sampler method) gen_cluster_script() (in module xyzpy.gen.cropping) (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) gen_qsub_script() (in module xyzpy.gen.cropping) (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) get_ndim_first() (in module xyzpy.gen.combo_runner)

getsizeof() (in module xyzpy) grow() (in module xyzpy) (in module xyzpy.gen.cropping) (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) grow_cluster() (in module xyzpy.gen.cropping) (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) grow_missing() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method)

H

handle_sequence_of_arrays() (in module xyzpy.plot.plotter_matplotlib) harvest_cases() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) harvest_combos() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) Harvester (class in xyzpy) (class in xyzpy.gen.farming)

harvester (xyzpy.Benchmarker attribute) heatmap() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) histogram() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib)

I

iheatmap() (in module xyzpy) (in module xyzpy.plot.plotter_bokeh) ilineplot() (in module xyzpy) (in module xyzpy.plot.plotter_bokeh) (xyzpy.Benchmarker method) infer_shape() (in module xyzpy.gen.combo_runner) is_case_missing() (in module xyzpy) (in module xyzpy.gen.case_runner)

is_prepared() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) is_ready_to_reap() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) iscatter() (in module xyzpy) (in module xyzpy.plot.plotter_bokeh)

L

label() (in module xyzpy) (in module xyzpy.gen.farming) last_df (xyzpy.gen.farming.Sampler attribute) (xyzpy.gen.farming.Sampler property) (xyzpy.Sampler attribute) (xyzpy.Sampler property) last_ds (xyzpy.gen.farming.Harvester property) (xyzpy.Harvester property) LinePlot (class in xyzpy) (class in xyzpy.plot.plotter_matplotlib) lineplot() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) (xyzpy.Benchmarker method)

load_crops() (in module xyzpy) (in module xyzpy.gen.cropping) load_df() (in module xyzpy) load_ds() (in module xyzpy) load_full_df() (xyzpy.gen.farming.Sampler method) (xyzpy.Sampler method) load_full_ds() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) load_function() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) load_info() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method)

M

mean (xyzpy.RunningStatistics attribute) merge_sync_conflict_datasets() (in module xyzpy) missing_results() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) module xyzpy xyzpy.gen xyzpy.gen.case_runner xyzpy.gen.combo_runner xyzpy.gen.cropping xyzpy.gen.farming xyzpy.gen.prepare xyzpy.plot xyzpy.plot.color xyzpy.plot.core xyzpy.plot.marker xyzpy.plot.plotter_bokeh xyzpy.plot.plotter_matplotlib xyzpy.plot.xyz_cmaps

mpl_multi_plot() (in module xyzpy.plot.plotter_matplotlib) multi_concat() (in module xyzpy.gen.combo_runner)

N

nan_like_result() (in module xyzpy.gen.combo_runner)

num_sown_batches (xyzpy.Crop property) (xyzpy.gen.cropping.Crop property)

P

parse_attrs() (in module xyzpy.gen.prepare) parse_case_results() (in module xyzpy.gen.prepare) parse_cases() (in module xyzpy.gen.prepare) parse_combo_results() (in module xyzpy.gen.prepare) parse_combos() (in module xyzpy.gen.prepare) parse_constants() (in module xyzpy.gen.prepare) parse_crop_details() (in module xyzpy.gen.cropping) parse_into_cases() (in module xyzpy) (in module xyzpy.gen.case_runner) parse_resources() (in module xyzpy.gen.prepare) parse_var_coords() (in module xyzpy.gen.prepare) parse_var_dims() (in module xyzpy.gen.prepare) parse_var_names() (in module xyzpy.gen.prepare) plot_colorbar() (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) plot_legend() (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) plot_lines() (xyzpy.LinePlot method) (xyzpy.plot.plotter_matplotlib.LinePlot method)

Plotter (class in xyzpy.plot.core) PlotterMatplotlib (class in xyzpy.plot.plotter_matplotlib) prepare() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) prepare_axes() (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) prepare_axes_labels() (xyzpy.plot.core.Plotter method) prepare_colors() (xyzpy.plot.core.Plotter method) prepare_heatmap_data() (xyzpy.plot.core.Plotter method) prepare_line_styles() (xyzpy.plot.core.Plotter method) prepare_markers() (xyzpy.plot.core.Plotter method) prepare_plot() (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) prepare_x_vals_histogram() (xyzpy.plot.core.Plotter method) prepare_xy_vals_lineplot() (xyzpy.plot.core.Plotter method) prepare_z_labels() (xyzpy.plot.core.Plotter method) prepare_z_vals() (xyzpy.plot.core.Plotter method) prepare_zorders() (xyzpy.plot.core.Plotter method) progbar() (in module xyzpy)

Q

qsub_grow() (in module xyzpy.gen.cropping) (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method)

R

reap() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) reap_combos() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) reap_combos_to_ds() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) reap_harvest() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) reap_runner() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) reap_samples() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) Reaper (class in xyzpy.gen.cropping)

rel_err (xyzpy.RunningStatistics attribute) resources (xyzpy.gen.farming.Runner property) (xyzpy.Runner property) results_to_df() (in module xyzpy.gen.combo_runner) results_to_ds() (in module xyzpy.gen.combo_runner) run() (xyzpy.Benchmarker method) run_cases() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) run_combos() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) Runner (class in xyzpy) (class in xyzpy.gen.farming) RunningCovariance (class in xyzpy) RunningStatistics (class in xyzpy)

S

sample_combos() (xyzpy.gen.farming.Sampler method) (xyzpy.Sampler method) sample_covar (xyzpy.RunningCovariance property) Sampler (class in xyzpy) (class in xyzpy.gen.farming) save_batch() (xyzpy.gen.cropping.Sower method) save_df() (in module xyzpy) save_ds() (in module xyzpy) save_full_df() (xyzpy.gen.farming.Sampler method) (xyzpy.Sampler method) save_full_ds() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) save_function_to_disk() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) save_info() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) save_merge_ds() (in module xyzpy)

scatter() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) set_axes_range() (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) set_axes_scale() (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) set_gridlines() (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) set_mappable() (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) set_spans() (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) set_tick_marks() (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) sort_dims() (in module xyzpy) sow_cases() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) sow_combos() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) sow_samples() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) Sower (class in xyzpy.gen.cropping) std (xyzpy.RunningStatistics attribute)

T

Timer (class in xyzpy)

trimna() (in module xyzpy)

U

unzip() (in module xyzpy)

update() (xyzpy.RunningStatistics method) update_from_it() (xyzpy.RunningStatistics method)

V

var (xyzpy.RunningStatistics attribute) var_coords (xyzpy.gen.farming.Runner property) (xyzpy.Runner property) var_dims (xyzpy.gen.farming.Runner property) (xyzpy.Runner property)

var_names (xyzpy.gen.farming.Runner property) (xyzpy.Runner property) visualize_tensor() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib)

X

xyz_colormaps() (in module xyzpy.plot.color) xyzpy module xyzpy.gen module xyzpy.gen.case_runner module xyzpy.gen.combo_runner module xyzpy.gen.cropping module xyzpy.gen.farming module xyzpy.gen.prepare module

xyzpy.plot module xyzpy.plot.color module xyzpy.plot.core module xyzpy.plot.marker module xyzpy.plot.plotter_bokeh module xyzpy.plot.plotter_matplotlib module xyzpy.plot.xyz_cmaps module