Index _ | A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | Z _ __call__() (xyzpy.gen.cropping.Reaper method) (xyzpy.gen.cropping.Sower method) (xyzpy.gen.farming.Harvester method) (xyzpy.gen.farming.Runner method) (xyzpy.Harvester method) (xyzpy.HeatMap method) (xyzpy.Histogram method) (xyzpy.LinePlot method) (xyzpy.plot.plotter_bokeh.IHeatMap method) (xyzpy.plot.plotter_bokeh.ILinePlot method) (xyzpy.plot.plotter_bokeh.IScatter method) (xyzpy.plot.plotter_matplotlib.HeatMap method) (xyzpy.plot.plotter_matplotlib.Histogram method) (xyzpy.plot.plotter_matplotlib.LinePlot method) (xyzpy.plot.plotter_matplotlib.Scatter method) (xyzpy.Runner method) (xyzpy.Scatter method) __commit_id__ (in module xyzpy._version) __del__() (xyzpy.MemoryMonitor method) (xyzpy.utils.MemoryMonitor method) __enter__() (xyzpy.gen.cropping.Sower method) (xyzpy.MemoryMonitor method) (xyzpy.Timer method) (xyzpy.utils.MemoryMonitor method) (xyzpy.utils.Timer method) __exit__() (xyzpy.gen.cropping.Sower method) (xyzpy.MemoryMonitor method) (xyzpy.Timer method) (xyzpy.utils.MemoryMonitor method) (xyzpy.utils.Timer method) __repr__() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) (xyzpy.gen.farming.Harvester method) (xyzpy.gen.farming.Runner method) (xyzpy.gen.farming.Sampler method) (xyzpy.Harvester method) (xyzpy.MemoryMonitor method) (xyzpy.Runner method) (xyzpy.RunningStatistics method) (xyzpy.Sampler method) (xyzpy.utils.MemoryMonitor method) (xyzpy.utils.RunningStatistics method) __slots__ (xyzpy.gen.ray_executor.RayFuture attribute) __str__() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) __version__ (in module xyzpy._version) __version_tuple__ (in module xyzpy._version) _acquire_affinity() (in module xyzpy.gen.cropping) _acquire_gpu() (in module xyzpy.gen.cropping) _all_nan_result (xyzpy.Crop attribute) (xyzpy.gen.cropping.Crop attribute) _attrs (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) _auto_min_time() (in module xyzpy.utils) _BASE (in module xyzpy.gen.cropping) _BASE_CLUSTER_GROW_SINGLE (in module xyzpy.gen.cropping) _BASE_CLUSTER_SCRIPT_END (in module xyzpy.gen.cropping) _batch_cases (xyzpy.gen.cropping.Sower attribute) _batch_counter (xyzpy.gen.cropping.Sower attribute) _batch_remainder (xyzpy.Crop attribute) (xyzpy.gen.cropping.Crop attribute) _BOKEH_MARKER_DICT (in module xyzpy.plot.marker) _BOKEH_MARKERS (in module xyzpy.plot.marker) _c_cols (xyzpy.plot.core.Plotter attribute) _cancelled (xyzpy.gen.ray_executor.RayFuture attribute) _cax_rel2abs_rect() (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) _CLUSTER_PBS_GROW_ALL_SCRIPT (in module xyzpy.gen.cropping) _CLUSTER_PBS_GROW_PARTIAL_SCRIPT (in module xyzpy.gen.cropping) _CLUSTER_SGE_GROW_ALL_SCRIPT (in module xyzpy.gen.cropping) _CLUSTER_SGE_GROW_PARTIAL_SCRIPT (in module xyzpy.gen.cropping) _CLUSTER_SLURM_GROW_ALL_SCRIPT (in module xyzpy.gen.cropping) _CLUSTER_SLURM_GROW_PARTIAL_SCRIPT (in module xyzpy.gen.cropping) _COLOR_CONVERT_METHODS (in module xyzpy.plot.color) _COLORS_DEFAULT (in module xyzpy.plot.infiniplot) _COLORS_MATPLOTLIB_TO_BOKEH() (in module xyzpy.plot.color) _COLORS_SORTED (in module xyzpy.plot.infiniplot) _compute_hue() (in module xyzpy.plot.plotter_matplotlib) _constants (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) _counter (xyzpy.gen.cropping.Sower attribute) _create_legend_merged() (xyzpy.plot.infiniplot.Infiniplotter method) _create_legend_split() (xyzpy.plot.infiniplot.Infiniplotter method) _data_range_calculated (xyzpy.plot.core.Plotter attribute) _DEFAULT_FN_CACHE_PATH (in module xyzpy.manage) _del_constants() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _del_ds() (xyzpy.plot.core.Plotter method) _del_fn() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) _del_fn_args() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _del_resources() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _del_var_coords() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _del_var_dims() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _del_var_names() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _draw_tensor_tree_branch() (in module xyzpy.plot.plotter_matplotlib) _engine_extensions (in module xyzpy.manage) _fn_args (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) _full_df (xyzpy.gen.farming.Sampler attribute) (xyzpy.Sampler attribute) _full_ds (xyzpy.gen.farming.Harvester attribute) (xyzpy.Harvester attribute) _get_constants() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _get_ds() (xyzpy.plot.core.Plotter method) _get_fn() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) _get_fn_args() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _get_fn_name() (in module xyzpy.utils) _get_resources() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _get_result() (in module xyzpy.gen.combo_runner) _get_var_coords() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _get_var_dims() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _get_var_names() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _HEATMAP_ALT_DEFAULTS (in module xyzpy.plot.plotter_bokeh) (in module xyzpy.plot.plotter_matplotlib) _HEATMAP_INVALID_KWARGS (in module xyzpy.plot.infiniplot) _HISTOGRAM_ALT_DEFAULTS (in module xyzpy.plot.plotter_matplotlib) _HISTOGRAM_SPECIFIC_OPTIONS (in module xyzpy.plot.plotter_matplotlib) _init_bokeh_nb() (in module xyzpy.plot.plotter_bokeh) _interactive (xyzpy.plot.plotter_bokeh.PlotterBokeh attribute) _last_df (xyzpy.gen.farming.Sampler attribute) (xyzpy.Sampler attribute) _last_ds (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) _LINESTYLES_DEFAULT (in module xyzpy.plot.infiniplot) _make_bold() (in module xyzpy.plot.infiniplot) _MARKERS (in module xyzpy.plot.marker) _MARKERS_DEFAULT (in module xyzpy.plot.infiniplot) _maybe_expand_combos() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) _maybe_inject_remote_opts() (xyzpy.gen.ray_executor.RayExecutor method) (xyzpy.RayExecutor method) _monitor() (xyzpy.MemoryMonitor method) (xyzpy.utils.MemoryMonitor method) _MPL_MARKER_DICT (in module xyzpy.plot.marker) _MPL_MARKERS (in module xyzpy.plot.marker) _num_results (xyzpy.Crop attribute) (xyzpy.gen.cropping.Crop attribute) _num_sown_batches (xyzpy.Crop attribute) (xyzpy.gen.cropping.Crop attribute) _obj (xyzpy.gen.ray_executor.RayFuture attribute) _parse_resource_ids() (in module xyzpy.gen.cropping) _PBS_ARRAY_HEADER (in module xyzpy.gen.cropping) _PBS_HEADER (in module xyzpy.gen.cropping) _PLOTTER_OPTS (in module xyzpy.plot.core) (in module xyzpy.plot.infiniplot) _ResourcePool (class in xyzpy.gen.cropping) _resources (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) _run_linear_executor() (in module xyzpy.gen.combo_runner) _run_linear_sequential() (in module xyzpy.gen.combo_runner) _SCATTER_ALT_DEFAULTS (in module xyzpy.plot.plotter_matplotlib) _set_constants() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _set_ds() (xyzpy.plot.core.Plotter method) _set_fn() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) _set_fn_args() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _set_resources() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _set_var_coords() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _set_var_dims() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _set_var_names() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) _SGE_ARRAY_HEADER (in module xyzpy.gen.cropping) _SGE_HEADER (in module xyzpy.gen.cropping) _SINGLE_LINE_MARKER (in module xyzpy.plot.marker) _SLURM_ARRAY_HEADER (in module xyzpy.gen.cropping) _SLURM_HEADER (in module xyzpy.gen.cropping) _str_2_tuple() (in module xyzpy.gen.prepare) _STYLE_SORT_ORDER (in module xyzpy.plot.infiniplot) _submit() (in module xyzpy.gen.combo_runner) _sync_info_from_disk() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) _unflatten() (in module xyzpy.gen.combo_runner) _unpack_dispatch (in module xyzpy.gen.ray_executor) _unpack_futures() (in module xyzpy.gen.ray_executor) _unpack_futures_dict() (in module xyzpy.gen.ray_executor) _unpack_futures_identity() (in module xyzpy.gen.ray_executor) _unpack_futures_list() (in module xyzpy.gen.ray_executor) _unpack_futures_tuple() (in module xyzpy.gen.ray_executor) _var_coords (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) _var_dims (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) _var_names (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) _XYZ_CMAPS (in module xyzpy.plot.xyz_cmaps) A AbstractHeatMap (class in xyzpy.plot.core) AbstractHistogram (class in xyzpy.plot.core) AbstractLinePlot (class in xyzpy.plot.core) AbstractScatter (class in xyzpy.plot.core) acquire() (xyzpy.gen.cropping._ResourcePool method) acquire_fn (xyzpy.gen.cropping._ResourcePool attribute) add_df() (xyzpy.gen.farming.Sampler method) (xyzpy.Sampler method) add_ds() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) add_visualize_legend() (in module xyzpy.plot.plotter_matplotlib) all_nan_result (xyzpy.Crop property) (xyzpy.gen.cropping.Crop property) anti_cm (in module xyzpy.plot.xyz_cmaps) anti_data (in module xyzpy.plot.xyz_cmaps) anti_r_cm (in module xyzpy.plot.xyz_cmaps) auto_add_extension() (in module xyzpy.manage) auto_colors() (in module xyzpy.plot.infiniplot) auto_heatmap() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) auto_histogram() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) auto_iheatmap() (in module xyzpy) (in module xyzpy.plot.plotter_bokeh) auto_ilineplot() (in module xyzpy) (in module xyzpy.plot.plotter_bokeh) auto_iscatter() (in module xyzpy) (in module xyzpy.plot.plotter_bokeh) auto_lineplot() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) auto_scatter() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) auto_xyz_ds() (in module xyzpy) (in module xyzpy.manage) autocorrect_kwargs() (in module xyzpy.utils) AutoHeatMap (class in xyzpy) (class in xyzpy.plot.plotter_matplotlib) AutoHistogram (class in xyzpy) (class in xyzpy.plot.plotter_matplotlib) autohue_opts (xyzpy.plot.infiniplot.Infiniplotter attribute) AutoIHeatMap (class in xyzpy.plot.plotter_bokeh) AutoILinePlot (class in xyzpy.plot.plotter_bokeh) AutoIScatter (class in xyzpy.plot.plotter_bokeh) AutoLinePlot (class in xyzpy) (class in xyzpy.plot.plotter_matplotlib) AutoScatter (class in xyzpy) (class in xyzpy.plot.plotter_matplotlib) available() (xyzpy.gen.cropping._ResourcePool method) B base_style (xyzpy.plot.infiniplot.Infiniplotter attribute) batchsize (xyzpy.Crop attribute) (xyzpy.gen.cropping.Crop attribute) benchmark() (in module xyzpy) (in module xyzpy.utils) benchmark_opts (xyzpy.Benchmarker attribute) (xyzpy.utils.Benchmarker attribute) Benchmarker (class in xyzpy) (class in xyzpy.utils) bokeh_multi_plot() (in module xyzpy.plot.plotter_bokeh) bshow() (in module xyzpy.plot.plotter_bokeh) BTCH_NM (in module xyzpy.gen.cropping) C C (xyzpy.RunningCovariance attribute) (xyzpy.utils.RunningCovariance attribute) c_coo (xyzpy.plot.core.Plotter attribute) cache_to_disk() (in module xyzpy) (in module xyzpy.manage) calc_clean_up_default_res() (in module xyzpy.gen.cropping) calc_color_norm() (xyzpy.plot.core.Plotter method) calc_data_range() (xyzpy.plot.core.Plotter method) calc_line_colors() (xyzpy.plot.core.Plotter method) calc_plot_range() (xyzpy.plot.core.Plotter method) calc_progress() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) calc_row_col_datasets() (in module xyzpy.plot.core) calc_use_legend_or_colorbar() (xyzpy.plot.core.Plotter method) cancel() (xyzpy.gen.ray_executor.RayFuture method) case_runner() (in module xyzpy) (in module xyzpy.gen.case_runner) case_runner_to_df (in module xyzpy) (in module xyzpy.gen.case_runner) case_runner_to_ds() (in module xyzpy) (in module xyzpy.gen.case_runner) check_bad() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) check_excess_dims() (in module xyzpy.plot.core) check_finished() (xyzpy.gen.cropping.Reaper method) check_for_duplicates() (in module xyzpy.gen.prepare) check_ready_to_reap() (in module xyzpy.gen.cropping) check_runs() (in module xyzpy) (in module xyzpy.manage) choose_batch_settings() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) choose_squarest_grid() (in module xyzpy.plot.plotter_matplotlib) chunks (xyzpy.gen.farming.Harvester attribute) (xyzpy.Harvester attribute) cimluv() (in module xyzpy) (in module xyzpy.plot.color) cimple() (in module xyzpy) (in module xyzpy.plot.color) cimple_bright() (in module xyzpy) (in module xyzpy.plot.color) clean_slurm_outputs() (in module xyzpy) (in module xyzpy.gen.cropping) cmoke() (in module xyzpy) (in module xyzpy.plot.color) color_to_colormap() (in module xyzpy.plot.infiniplot) combo_runner() (in module xyzpy) (in module xyzpy.gen.combo_runner) combo_runner_core() (in module xyzpy.gen.combo_runner) combo_runner_to_df (in module xyzpy) (in module xyzpy.gen.combo_runner) combo_runner_to_ds() (in module xyzpy) (in module xyzpy.gen.combo_runner) commit_id (in module xyzpy._version) completed_results() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) constants (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) converged() (xyzpy.RunningStatistics method) (xyzpy.utils.RunningStatistics method) convert_colors() (in module xyzpy) (in module xyzpy.plot.color) convert_colors_string_to_tuple() (in module xyzpy.plot.color) count (xyzpy.RunningCovariance attribute) (xyzpy.RunningCovarianceMatrix property) (xyzpy.RunningStatistics attribute), [1] (xyzpy.utils.RunningCovariance attribute) (xyzpy.utils.RunningCovarianceMatrix property) (xyzpy.utils.RunningStatistics attribute), [1] covar (xyzpy.RunningCovariance property) (xyzpy.utils.RunningCovariance property) covar_matrix (xyzpy.RunningCovarianceMatrix property) (xyzpy.utils.RunningCovarianceMatrix property) create_legend() (xyzpy.plot.infiniplot.Infiniplotter method) Crop (class in xyzpy) (class in xyzpy.gen.cropping) crop (xyzpy.gen.cropping.Reaper attribute) (xyzpy.gen.cropping.Sower attribute) Crop() (xyzpy.gen.farming.Harvester method) (xyzpy.gen.farming.Runner method) (xyzpy.gen.farming.Sampler method) (xyzpy.Harvester method) (xyzpy.Runner method) (xyzpy.Sampler method) cultivate() (in module xyzpy) (in module xyzpy.gen.farming) (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) D data_name (xyzpy.gen.farming.Harvester attribute) (xyzpy.gen.farming.Sampler attribute) (xyzpy.Harvester attribute) (xyzpy.Sampler attribute) default_combos (xyzpy.gen.farming.Sampler attribute) (xyzpy.Sampler attribute) default_remote_opts (xyzpy.gen.ray_executor.RayExecutor attribute) (xyzpy.RayExecutor attribute) default_runner_settings (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) delete_all() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) delete_df() (xyzpy.gen.farming.Sampler method) (xyzpy.Sampler method) delete_ds() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) dictify() (in module xyzpy.gen.prepare) do_axes_formatting() (xyzpy.plot.infiniplot.Infiniplotter method) done() (xyzpy.gen.ray_executor.RayFuture method) doublerainbow (in module xyzpy.plot.color) doublerainbow_r (in module xyzpy.plot.color) drop_sel() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) ds (xyzpy.Benchmarker attribute) (xyzpy.Benchmarker property) (xyzpy.plot.core.Plotter attribute) (xyzpy.plot.infiniplot.Infiniplotter attribute) (xyzpy.utils.Benchmarker attribute) (xyzpy.utils.Benchmarker property) E engine (xyzpy.gen.farming.Harvester attribute) (xyzpy.gen.farming.Sampler attribute) (xyzpy.Harvester attribute) (xyzpy.Sampler attribute) ensure_dirs_exists() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) err (xyzpy.RunningStatistics attribute) (xyzpy.RunningStatistics property) (xyzpy.utils.RunningStatistics attribute) (xyzpy.utils.RunningStatistics property) err_kws (xyzpy.plot.infiniplot.Infiniplotter attribute) estimate_from_repeats() (in module xyzpy) (in module xyzpy.utils) expand_dims() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) F find_missing_cases() (in module xyzpy) (in module xyzpy.gen.case_runner) flatten() (in module xyzpy.utils) fn (xyzpy.Crop attribute) (xyzpy.gen.cropping.Crop attribute) (xyzpy.gen.farming.Harvester property) (xyzpy.gen.farming.Runner attribute) (xyzpy.gen.farming.Sampler property) (xyzpy.Harvester property) (xyzpy.Runner attribute) (xyzpy.Sampler property) fn_args (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) FNCT_NM (in module xyzpy.gen.cropping) format_number_with_error() (in module xyzpy) (in module xyzpy.utils) free (xyzpy.gen.cropping._ResourcePool attribute) from_pickle() (in module xyzpy.gen.cropping) from_raw() (xyzpy.gen.cropping._ResourcePool class method) fruity_cm (in module xyzpy.plot.xyz_cmaps) fruity_data (in module xyzpy.plot.xyz_cmaps) fruity_r_cm (in module xyzpy.plot.xyz_cmaps) full_df (xyzpy.gen.farming.Sampler attribute) (xyzpy.gen.farming.Sampler property) (xyzpy.Sampler attribute) (xyzpy.Sampler property) full_ds (xyzpy.gen.farming.Harvester property) (xyzpy.Harvester property) G gen_cases_fnargs() (xyzpy.gen.farming.Sampler method) (xyzpy.Sampler method) gen_cluster_script() (in module xyzpy.gen.cropping) gen_qsub_script() (in module xyzpy.gen.cropping) get_default_cmap() (in module xyzpy.plot.infiniplot) get_default_colormaps() (in module xyzpy.plot.infiniplot) get_default_sequential_cm() (in module xyzpy.plot.color) get_deploy() (in module xyzpy.gen.ray_executor) get_fn_as_remote_object() (in module xyzpy.gen.ray_executor) get_ndim_first() (in module xyzpy.gen.combo_runner) get_neutral_style() (in module xyzpy) (in module xyzpy.plot.infiniplot) get_peak_memory_usage() (in module xyzpy) (in module xyzpy.utils) get_picklelib() (in module xyzpy.gen.cropping) get_ray() (in module xyzpy.gen.ray_executor) get_remote_fn() (in module xyzpy.gen.ray_executor) getsizeof() (in module xyzpy) (in module xyzpy.utils) grow() (in module xyzpy) (in module xyzpy.gen.cropping) (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) grow_cluster() (in module xyzpy.gen.cropping) grow_missing() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) grow_subprocess() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) H handle_existing() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) handle_sequence_of_arrays() (in module xyzpy.plot.plotter_matplotlib) harvest_cases() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) harvest_combos() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) Harvester (class in xyzpy) (class in xyzpy.gen.farming) harvester (xyzpy.Benchmarker attribute), [1] (xyzpy.utils.Benchmarker attribute), [1] HeatMap (class in xyzpy) (class in xyzpy.plot.plotter_matplotlib) heatmap() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) Histogram (class in xyzpy) (class in xyzpy.plot.plotter_matplotlib) histogram() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) I IHeatMap (class in xyzpy.plot.plotter_bokeh) iheatmap() (in module xyzpy) (in module xyzpy.plot.plotter_bokeh) ILinePlot (class in xyzpy.plot.plotter_bokeh) ilineplot() (in module xyzpy) (in module xyzpy.plot.plotter_bokeh) (xyzpy.Benchmarker method) (xyzpy.utils.Benchmarker method) infer_shape() (in module xyzpy.gen.combo_runner) infiniplot() (in module xyzpy) (in module xyzpy.plot.infiniplot) Infiniplotter (class in xyzpy.plot.infiniplot) INFINIPLOTTER_DEFAULTS (in module xyzpy.plot.infiniplot) INFO_NM (in module xyzpy.gen.cropping) init_mapped_dim() (xyzpy.plot.infiniplot.Infiniplotter method) input_values (xyzpy.plot.infiniplot.Infiniplotter attribute) intercept_call_arg() (in module xyzpy.plot.core) interval (xyzpy.MemoryMonitor attribute), [1] (xyzpy.utils.MemoryMonitor attribute), [1] is_case_missing() (in module xyzpy) (in module xyzpy.gen.case_runner) is_heatmap (xyzpy.plot.infiniplot.Infiniplotter attribute) is_histogram (xyzpy.plot.infiniplot.Infiniplotter attribute) is_prepared() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) is_ready_to_reap() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) is_running (xyzpy.MemoryMonitor attribute) (xyzpy.utils.MemoryMonitor attribute) is_scatter (xyzpy.plot.infiniplot.Infiniplotter attribute) IScatter (class in xyzpy.plot.plotter_bokeh) iscatter() (in module xyzpy) (in module xyzpy.plot.plotter_bokeh) isiterable() (in module xyzpy.utils) J jelly_cm (in module xyzpy.plot.xyz_cmaps) jelly_data (in module xyzpy.plot.xyz_cmaps) jelly_r_cm (in module xyzpy.plot.xyz_cmaps) K kernels (xyzpy.Benchmarker attribute) (xyzpy.utils.Benchmarker attribute) kwargs (xyzpy.plot.infiniplot.Infiniplotter attribute) L label() (in module xyzpy) (in module xyzpy.gen.farming) labels (xyzpy.plot.infiniplot.Infiniplotter attribute) last_df (xyzpy.gen.farming.Sampler attribute) (xyzpy.gen.farming.Sampler property) (xyzpy.Sampler attribute) (xyzpy.Sampler property) last_ds (xyzpy.gen.farming.Harvester property) (xyzpy.gen.farming.Runner property) (xyzpy.Harvester property) (xyzpy.Runner property) lichen_cm (in module xyzpy.plot.xyz_cmaps) lichen_data (in module xyzpy.plot.xyz_cmaps) lichen_r_cm (in module xyzpy.plot.xyz_cmaps) linear_rgb_to_srgb() (in module xyzpy.plot.color) linear_rgb_to_xyz() (in module xyzpy.plot.color) LinePlot (class in xyzpy) (class in xyzpy.plot.plotter_matplotlib) lineplot() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) (xyzpy.Benchmarker method) (xyzpy.utils.Benchmarker method) load_batch() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) load_crops() (in module xyzpy) (in module xyzpy.gen.cropping) load_df() (in module xyzpy) (in module xyzpy.manage) load_ds() (in module xyzpy) (in module xyzpy.manage) load_full_df() (xyzpy.gen.farming.Sampler method) (xyzpy.Sampler method) load_full_ds() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) load_function() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) load_info() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) load_result() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) M M2 (xyzpy.RunningStatistics attribute) (xyzpy.utils.RunningStatistics attribute) make_ax_square_after_plotted() (in module xyzpy.plot.plotter_matplotlib) manage_slurm_outputs() (in module xyzpy) (in module xyzpy.gen.cropping) map() (xyzpy.gen.ray_executor.RayExecutor method) (xyzpy.RayExecutor method) mapped (xyzpy.plot.infiniplot.Infiniplotter attribute) mean (xyzpy.RunningStatistics attribute), [1] (xyzpy.utils.RunningStatistics attribute), [1] MemoryMonitor (class in xyzpy) (class in xyzpy.utils) merge_sync_conflict_datasets() (in module xyzpy) (in module xyzpy.manage) missing_results() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) mod_sat() (in module xyzpy.plot.infiniplot) module xyzpy, [1] xyzpy._version xyzpy.gen, [1] xyzpy.gen.case_runner, [1] xyzpy.gen.combo_runner, [1] xyzpy.gen.cropping, [1] xyzpy.gen.farming, [1] xyzpy.gen.prepare, [1] xyzpy.gen.ray_executor xyzpy.manage xyzpy.plot, [1] xyzpy.plot.color, [1] xyzpy.plot.core, [1] xyzpy.plot.infiniplot xyzpy.plot.marker, [1] xyzpy.plot.plotter_bokeh, [1] xyzpy.plot.plotter_matplotlib, [1] xyzpy.plot.xyz_cmaps, [1] xyzpy.utils monitor_thread (xyzpy.MemoryMonitor attribute) (xyzpy.utils.MemoryMonitor attribute) mpl_multi_plot() (in module xyzpy.plot.plotter_matplotlib) multi_concat() (in module xyzpy.gen.combo_runner) N n (xyzpy.RunningCovarianceMatrix attribute) (xyzpy.utils.RunningCovarianceMatrix attribute) name (xyzpy.Crop attribute) (xyzpy.gen.cropping.Crop attribute) names (xyzpy.Benchmarker attribute) (xyzpy.utils.Benchmarker attribute) nan_like_result() (in module xyzpy.gen.combo_runner) neon_cm (in module xyzpy.plot.xyz_cmaps) neon_data (in module xyzpy.plot.xyz_cmaps) neon_r_cm (in module xyzpy.plot.xyz_cmaps) neutral_style() (in module xyzpy) (in module xyzpy.plot.infiniplot) num_batches (xyzpy.Crop attribute) (xyzpy.gen.cropping.Crop attribute) num_results (xyzpy.Crop property) (xyzpy.gen.cropping.Crop property) num_sown_batches (xyzpy.Crop property) (xyzpy.gen.cropping.Crop property) O oklab_to_oklch() (in module xyzpy.plot.color) oklab_to_xyz() (in module xyzpy.plot.color) oklch_to_oklab() (in module xyzpy.plot.color) oklch_to_rgb() (in module xyzpy.plot.color) output_values (xyzpy.plot.infiniplot.Infiniplotter attribute) P parent_dir (xyzpy.Crop attribute) (xyzpy.gen.cropping.Crop attribute) parse_attrs (in module xyzpy.gen.prepare) parse_case_results() (in module xyzpy.gen.prepare) parse_cases() (in module xyzpy.gen.prepare) parse_combo_results() (in module xyzpy.gen.prepare) parse_combos() (in module xyzpy.gen.prepare) parse_constants (in module xyzpy.gen.prepare) parse_constants() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) parse_crop_details() (in module xyzpy.gen.cropping) parse_fn_args() (in module xyzpy.gen.prepare) parse_fn_farmer() (in module xyzpy.gen.cropping) parse_into_cases() (in module xyzpy) (in module xyzpy.gen.case_runner) parse_resources (in module xyzpy.gen.prepare) parse_var_coords (in module xyzpy.gen.prepare) parse_var_dims() (in module xyzpy.gen.prepare) parse_var_names() (in module xyzpy.gen.prepare) peak (xyzpy.MemoryMonitor attribute), [1] (xyzpy.utils.MemoryMonitor attribute), [1] plot() (xyzpy.Benchmarker method) (xyzpy.utils.Benchmarker method) plot_colorbar() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) plot_heatmap() (xyzpy.HeatMap method) (xyzpy.plot.infiniplot.Infiniplotter method) (xyzpy.plot.plotter_bokeh.IHeatMap method) (xyzpy.plot.plotter_matplotlib.HeatMap method) plot_histogram() (xyzpy.Histogram method) (xyzpy.plot.plotter_matplotlib.Histogram method) plot_legend() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) plot_lines() (xyzpy.LinePlot method) (xyzpy.plot.infiniplot.Infiniplotter method) (xyzpy.plot.plotter_bokeh.ILinePlot method) (xyzpy.plot.plotter_matplotlib.LinePlot method) plot_scatter() (xyzpy.plot.plotter_bokeh.IScatter method) (xyzpy.plot.plotter_matplotlib.Scatter method) (xyzpy.Scatter method) Plotter (class in xyzpy.plot.core) PLOTTER_DEFAULTS (in module xyzpy.plot.core) PlotterBokeh (class in xyzpy.plot.plotter_bokeh) PlotterMatplotlib (class in xyzpy.plot.plotter_matplotlib) post_fix() (in module xyzpy.manage) prepare() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) prepare_axes() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) prepare_axes_labels() (xyzpy.plot.core.Plotter method) prepare_colors() (xyzpy.plot.core.Plotter method) prepare_data_multi_grid() (xyzpy.plot.core.AbstractHeatMap method) (xyzpy.plot.core.AbstractHistogram method) (xyzpy.plot.core.AbstractLinePlot method) (xyzpy.plot.core.AbstractScatter method) prepare_data_single() (xyzpy.plot.core.AbstractHeatMap method) (xyzpy.plot.core.AbstractHistogram method) (xyzpy.plot.core.AbstractLinePlot method) (xyzpy.plot.core.AbstractScatter method) prepare_heatmap_data() (xyzpy.plot.core.Plotter method) prepare_line_styles() (xyzpy.plot.core.Plotter method) prepare_markers() (xyzpy.plot.core.Plotter method) prepare_plot() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) prepare_x_vals_histogram() (xyzpy.plot.core.Plotter method) prepare_xy_vals_lineplot() (xyzpy.plot.core.Plotter method) prepare_z_labels() (xyzpy.plot.core.Plotter method) prepare_z_vals() (xyzpy.plot.core.Plotter method) prepare_zorders() (xyzpy.plot.core.Plotter method) prettify() (in module xyzpy.plot.core) prod() (in module xyzpy.utils) progbar() (in module xyzpy) (in module xyzpy.utils) Q qsub_grow() (in module xyzpy.gen.cropping) R RayExecutor (class in xyzpy) (class in xyzpy.gen.ray_executor) RayFuture (class in xyzpy.gen.ray_executor) RayGPUExecutor (class in xyzpy) (class in xyzpy.gen.ray_executor) rcs (xyzpy.RunningCovarianceMatrix attribute) (xyzpy.utils.RunningCovarianceMatrix attribute) read_from_disk() (in module xyzpy.gen.cropping) reap() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) reap_combos() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) reap_combos_to_ds() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) reap_harvest() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) reap_runner() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) reap_samples() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) Reaper (class in xyzpy.gen.cropping) rel_err (xyzpy.RunningStatistics attribute) (xyzpy.RunningStatistics property) (xyzpy.utils.RunningStatistics attribute) (xyzpy.utils.RunningStatistics property) release() (xyzpy.gen.cropping._ResourcePool method) remaining_dims (xyzpy.plot.infiniplot.Infiniplotter attribute) remaining_ranges (xyzpy.plot.infiniplot.Infiniplotter attribute) report_memory() (in module xyzpy) (in module xyzpy.utils) report_memory_gpu() (in module xyzpy) (in module xyzpy.utils) resources (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) result() (xyzpy.gen.ray_executor.RayFuture method) results (xyzpy.gen.cropping.Reaper attribute) results_to_df() (in module xyzpy.gen.combo_runner) results_to_ds() (in module xyzpy.gen.combo_runner) rgb_to_oklch() (in module xyzpy.plot.color) RSLT_NM (in module xyzpy.gen.cropping) run() (xyzpy.Benchmarker method) (xyzpy.utils.Benchmarker method) run_cases() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) run_combos() (xyzpy.gen.farming.Runner method) (xyzpy.Runner method) Runner (class in xyzpy) (class in xyzpy.gen.farming) runner (xyzpy.Benchmarker attribute) (xyzpy.Crop property) (xyzpy.gen.cropping.Crop property) (xyzpy.gen.farming.Harvester attribute) (xyzpy.gen.farming.Sampler attribute) (xyzpy.Harvester attribute) (xyzpy.Sampler attribute) (xyzpy.utils.Benchmarker attribute) RunningCovariance (class in xyzpy) (class in xyzpy.utils) RunningCovarianceMatrix (class in xyzpy) (class in xyzpy.utils) RunningStatistics (class in xyzpy) (class in xyzpy.utils) rust_cm (in module xyzpy.plot.xyz_cmaps) rust_data (in module xyzpy.plot.xyz_cmaps) rust_r_cm (in module xyzpy.plot.xyz_cmaps) S sample_combos() (xyzpy.gen.farming.Sampler method) (xyzpy.Sampler method) sample_covar (xyzpy.RunningCovariance property) (xyzpy.utils.RunningCovariance property) sample_covar_matrix (xyzpy.RunningCovarianceMatrix property) (xyzpy.utils.RunningCovarianceMatrix property) Sampler (class in xyzpy) (class in xyzpy.gen.farming) save_batch() (xyzpy.gen.cropping.Sower method) save_df() (in module xyzpy) (in module xyzpy.manage) save_ds() (in module xyzpy) (in module xyzpy.manage) save_fn (xyzpy.Crop attribute) (xyzpy.gen.cropping.Crop attribute) save_full_df() (xyzpy.gen.farming.Sampler method) (xyzpy.Sampler method) save_full_ds() (xyzpy.gen.farming.Harvester method) (xyzpy.Harvester method) save_function_to_disk() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) save_info() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) save_merge_ds() (in module xyzpy) (in module xyzpy.manage) save_result() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) Scatter (class in xyzpy) (class in xyzpy.plot.plotter_matplotlib) scatter() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) (xyzpy.gen.ray_executor.RayExecutor method) (xyzpy.RayExecutor method) set_axes_labels() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) set_axes_range() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) set_axes_scale() (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) set_gridlines() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) set_mappable() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) set_panel_label() (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) set_sources() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) set_sources_heatmap() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) set_spans() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) set_tick_marks() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) set_tools() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) setup (xyzpy.Benchmarker attribute) (xyzpy.utils.Benchmarker attribute) setup_fig_ax() (in module xyzpy.plot.plotter_matplotlib) show() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) (xyzpy.plot.plotter_matplotlib.PlotterMatplotlib method) show_and_close() (in module xyzpy.plot.plotter_matplotlib) shuffle (xyzpy.Crop attribute) (xyzpy.gen.cropping.Crop attribute) shutdown() (xyzpy.gen.ray_executor.RayExecutor method) (xyzpy.RayExecutor method) sizes (xyzpy.plot.infiniplot.Infiniplotter attribute) sort_dims() (in module xyzpy) (in module xyzpy.manage) sow_cases() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) sow_combos() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) sow_samples() (xyzpy.Crop method) (xyzpy.gen.cropping.Crop method) Sower (class in xyzpy.gen.cropping) srgb_to_linear_rgb() (in module xyzpy.plot.color) start() (xyzpy.MemoryMonitor method) (xyzpy.utils.MemoryMonitor method) std (xyzpy.RunningStatistics attribute) (xyzpy.RunningStatistics property) (xyzpy.utils.RunningStatistics attribute) (xyzpy.utils.RunningStatistics property) stop() (xyzpy.MemoryMonitor method) (xyzpy.utils.MemoryMonitor method) submit() (xyzpy.gen.ray_executor.RayExecutor method) (xyzpy.RayExecutor method) T ticklabels (xyzpy.plot.infiniplot.Infiniplotter attribute) Timer (class in xyzpy) (class in xyzpy.utils) to_colormap() (in module xyzpy.plot.infiniplot) to_colors() (in module xyzpy.plot.plotter_matplotlib) to_pickle() (in module xyzpy.gen.cropping) to_uncertainties() (xyzpy.RunningCovarianceMatrix method) (xyzpy.utils.RunningCovarianceMatrix method) trimna() (in module xyzpy) (in module xyzpy.manage) U unmapped (xyzpy.plot.infiniplot.Infiniplotter attribute) unzip() (in module xyzpy) (in module xyzpy.utils) update() (xyzpy.plot.plotter_bokeh.PlotterBokeh method) (xyzpy.RunningCovariance method) (xyzpy.RunningCovarianceMatrix method) (xyzpy.RunningStatistics method) (xyzpy.utils.RunningCovariance method) (xyzpy.utils.RunningCovarianceMatrix method) (xyzpy.utils.RunningStatistics method) update_from_it() (xyzpy.RunningCovariance method) (xyzpy.RunningCovarianceMatrix method) (xyzpy.RunningStatistics method) (xyzpy.utils.RunningCovariance method) (xyzpy.utils.RunningCovarianceMatrix method) (xyzpy.utils.RunningStatistics method) use_neutral_style() (in module xyzpy.plot.infiniplot) used (xyzpy.gen.cropping._ResourcePool attribute) V var (xyzpy.RunningStatistics attribute) (xyzpy.RunningStatistics property) (xyzpy.utils.RunningStatistics attribute) (xyzpy.utils.RunningStatistics property) var_coords (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) var_dims (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) var_names (xyzpy.gen.farming.Runner attribute) (xyzpy.Runner attribute) version (in module xyzpy._version) version_tuple (in module xyzpy._version) visualize_matrix() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) visualize_tensor() (in module xyzpy) (in module xyzpy.plot.plotter_matplotlib) visualize_tensor_tree() (in module xyzpy.plot.plotter_matplotlib) W write_to_disk() (in module xyzpy.gen.cropping) X x (xyzpy.plot.infiniplot.Infiniplotter attribute) x_coo (xyzpy.plot.core.Plotter attribute) x_err (xyzpy.plot.core.Plotter attribute) xmean (xyzpy.RunningCovariance attribute) (xyzpy.utils.RunningCovariance attribute) xyz_cm (in module xyzpy.plot.xyz_cmaps) xyz_colormaps() (in module xyzpy.plot.color) xyz_data (in module xyzpy.plot.xyz_cmaps) xyz_r_cm (in module xyzpy.plot.xyz_cmaps) xyz_to_linear_rgb() (in module xyzpy.plot.color) xyz_to_oklab() (in module xyzpy.plot.color) XYZError xyzpy module, [1] xyzpy._version module xyzpy.gen module, [1] xyzpy.gen.case_runner module, [1] xyzpy.gen.combo_runner module, [1] xyzpy.gen.cropping module, [1] xyzpy.gen.farming module, [1] xyzpy.gen.prepare module, [1] xyzpy.gen.ray_executor module xyzpy.manage module xyzpy.plot module, [1] xyzpy.plot.color module, [1] xyzpy.plot.core module, [1] xyzpy.plot.infiniplot module xyzpy.plot.marker module, [1] xyzpy.plot.plotter_bokeh module, [1] xyzpy.plot.plotter_matplotlib module, [1] xyzpy.plot.xyz_cmaps module, [1] xyzpy.utils module Y y (xyzpy.plot.infiniplot.Infiniplotter attribute) y_coo (xyzpy.plot.core.Plotter attribute) y_err (xyzpy.plot.core.Plotter attribute) ymean (xyzpy.RunningCovariance attribute) (xyzpy.utils.RunningCovariance attribute) Z z (xyzpy.plot.infiniplot.Infiniplotter attribute) z_coo (xyzpy.plot.core.Plotter attribute)